Genome Diversity Center

at the Institute of Evolution, University of Haifa

(Since August 2000)
Head: Edward N. Trifonov




Initiation


Relevant references:

Gershenzon, N. I., Trifonov, E. N., Ioshikhes, I. P.,
The features of Drosophila core promoters revealed by statistical analysis.
BMC Genomics 7:161 (2006)

Bolshoy, A. & Nevo, E.
Ecologic genomics of DNA: upstream bending in prokaryotic promoters.
Genome Res. 10, 1185-1193 (2000).

Gabrielian, A.E., Landsman, D. & Bolshoy, A.
Curved DNA in promoter sequences.
Silico Biol. 1, 183-196, (1999).


Ozoline, O. N., Deev, A. A., Trifonov, E. N.,
DNA bendability - a novel feature in E. coli promoter recognition.
J. Biomol. Str. Dyn. 16, 825-831 (1999)

Ioshikhes, I., Trifonov, E. N., Zhang, M. Q.,
Periodical distribution of transcription factor sites in promoter regions and connection with chromatin structure.
Proc. Natl. Acad. Sci. USA 96, 2891-2895 (1999)

Bucher, P., Trifonov, E. N., CCAAT box revisited - bidirectionality, location and context.
J. Biomolec. Str. and Dynamics 5, 1231-1236 (1988)

Bucher, P., Trifonov, E. N., On Nussinov's compilation of eukaryotic transcription initiation sites.
J. Theor. Biol. 126, 373-375 (1987)

Bucher, P., Trifonov, E. N., Compilation and analysis of eukaryotic Pol II promoter sequences.
Nucl. Acids Res. 14, 10009-10026 (1986)

Trifonov, E. N., Sequence-dependent variations of B-DNA structure and protein-DNA recognition.
Cold Spring Harbor Symp. Quant. Biol. 47, 271-278 (1983)