Genome Diversity Center

at the Institute of Evolution, University of Haifa

(Since August 2000)
Head: Edward N. Trifonov




Varia


More references:

Rapoport, A. E., Trifonov, E. N.
Excessive clustering of third codon position pyrimidines in prokaryotes.
J Biomolec Str Dyn 25, 647-653 (2008)

Gabdank, I., Barash, D., Trifonov, E. N.,
Tracing ancient mRNA hairpins.
J Biomol Str Dyn 24, 163-170 (2006)

Barash, D., Nonlinear diffusion filtering on extended neighbourhood,
Applied Numerical Mathematics, 52, 1-11, (2005)

Barash, D., Deleterious mutation prediction in the secondary structure of RNAs,
Nucl. Acids Res. 31, 6578-6584 (2003)

Bellgard, M., Gamble, T., Reynolds, M., Hunter, A., Trifonov, E., Taplin, R., Gap Mapping: A paradigm for aligning two sequences. Applied Bioinformatics 2, Suppl. 3, 1-5 (2003)

Bellgard, M., Schibeci, D., Trifonov, E. N., Gojobori, T.,
Early detection of G+C differences in bacterial species inferred from the comparative analysis
of the two completely sequenced Helicobacter pylori strains.
J. Mol. Evol. 53, 465-468 (2001)

Razin, S. V., Ioudinkova, E. S., Trifonov, E. N., Scherrer, K.,
Non-clonability correlates with genomic instability: a case study of a unique DNA region.
J. Mol. Biol. 307, 481-486 (2001)

Trifonov, E. N., Earliest pages of bioinformatics. Bioinformatics 16, 5-9 (2000)

Trifonov, E. N., Upstream. In: "Encyclopedia of Molecular Biology",
T. E. Creighton, Ed., John Wiley & Sons, Inc., New York, 1999, p. 2726-2727

Trifonov, E. N., Palindrome. In: "Encyclopedia of Molecular Biology",
T. E. Creighton, Ed., John Wiley & Sons, Inc., New York, 1999, p. 1759-1760

Trifonov, E. N., Inverted repeats. In: "Encyclopedia of Molecular Biology",
T. E. Creighton, Ed., John Wiley & Sons, Inc., New York, 1999, p. 1310

Trifonov, E. N., Downstream. In: "Encyclopedia of Molecular Biology",
T. E. Creighton, Ed., John Wiley & Sons, Inc., New York, 1999, p. 766-767

Trifonov, E. N., Direct repeats. In: "Encyclopedia of Molecular Biology",
T. E. Creighton, Ed., John Wiley & Sons, Inc., New York, 1999, p. 683

Jurka, J., Klonowski, P., Trifonov, E. N.,
Mammalian retroposons integrate at sequence-dependent DNA kinks.
J. Biomolec. Str. Dyn. 15, 717-721 (1998)

Trifonov, E. N., Konopka, A. K., Jovin, T. M.,
Unusual frequencies of certain alternating purine-pyrimidine runs in natural DNA sequences. Relation to Z-DNA.
FEBS Let. 185, 197-202 (1985)

Trifonov, E. N., Bolshoi, G.,
Open and closed 5S rRNA - the only two universal structures encoded in the nucleotide sequences.
J. Molec. Biol. 169, 1-13 (1983)

Nussinov, R., Sussman, J. L.,
Trifonov, E. N., MS2 RNA has a potential to form an unusually large number of stable hairpins.
J. Theor. Biol. 85, 481-486 (1980)